Scopus İndeksli Yayınlar Koleksiyonu
Permanent URI for this collectionhttps://hdl.handle.net/20.500.12573/395
Browse
3 results
Search Results
Article Citation - WoS: 56Citation - Scopus: 69Synchrosqueezing Transform Based Feature Extraction From EEG Signals for Emotional State Prediction(Elsevier Sci Ltd, 2019-07) Ozel, Pinar; Akan, Aydin; Yilmaz, BulentThis paper presents a novel method for emotion recognition based on time-frequency analysis using multivariate synchrosqueezing transform (MSST) of multichannel electroencephalography (EEG) signals. With the advancements of the multichannel sensor applications, the need for multivariate algorithms has become obvious for extracting features that stem from multichannel dependency in addition to mono-channel features. In order to model the joint oscillatory structure of these multichannel signals, MSST has recently been proposed. It uses the concepts of joint instantaneous frequency and bandwidth. Electrophysiological data processing mostly requires joint time-frequency analysis in addition to both time and frequency analysis separately. The short-time Fourier transform (STFT) and wavelet transform (WT) are the main approaches utilized in time-frequency analysis. In this paper, the feasibility and performance of multivariate wavelet-based synchrosqueezing algorithm was demonstrated on EEG signals obtained from publically available DEAP database by comparing with its univariate version. Eight emotional states were considered by combining arousal-valence and dominance dimensions. Using linear support vector machines (SVM) as a classifier, MSST and its univariate version resulted in the highest prediction accuracy rates of (9) over tilde3% among all emotional states. (C) 2019 Elsevier Ltd. All rights reserved.Article Citation - WoS: 18Citation - Scopus: 21Parameter Investigation of Topological Data Analysis for EEG Signals(Elsevier Sci Ltd, 2021-01) Altindis, Fatih; Yilmaz, Bulent; Borisenok, Sergey; Icoz, KutayTopological data analysis (TDA) methods have become appealing in EEG signal processing, because they may help the scientists explore new features of complex and large amount of data by simplifying the process from a geometrical perspective. Time delay embedding is a common approach to embed EEG signals into the state space. Parameters of this embedding method are variable and the structure of the state space can be entirely different depending on their selection. Additionally, extracted persistent homologies of the state spaces depend on filtration level and the number of points used. In this study, we showed how to adapt false nearest neighbor (FNN) test to find out the suitable/optimal time embedding parameters (i.e., time delay and embedding dimension) for EEG signals, and compared their effects on different types of artefacts and motor intention waves that are commonly used in brain-computer interfaces. We extracted and compared persistent homologies of state spaces that were reconstructed with four different sets of parameters. Later, the effect of filtration level on extracted persistent homologies was compared, and statistical significance levels were computed between leftand right-hand movement imaginations. Finally, computational cost of the discussed methods was found, and the adaptability of this method to a real-time application was evaluated. We demonstrated that the discussed parameters of the TDA approach were highly crucial to extract true topological features of the EEG signals, and the adapted testing approaches depicted the applicability of this approach on real-time analysis of EEG signals.Article Citation - WoS: 22Citation - Scopus: 29Automated Quantification of Immunomagnetic Beads and Leukemia Cells from Optical Microscope Images(Elsevier Sci Ltd, 2019-03) Uslu, Fatma; Icoz, Kutay; Tasdemir, Kasim; Yilmaz, BulentQuantification of tumor cells is crucial for early detection and monitoring the progress of cancer. Several methods have been developed for detecting tumor cells. However, automated quantification of cells in the presence of immunomagnetic beads has not been studied. In this study, we developed computer vision based algorithms to quantify the leukemia cells captured and separated by micron size immunomagnetic beads. Color, size based object identification and machine learning based methods were implemented to quantify targets in the images recorded by a bright field microscope. Images acquired by a 40x or a 20x objective were analyzed, the immunomagnetic beads were detected with an error rate of 0.0171 and 0.0384 respectively. Our results reveal that the proposed method attains 91.6% precision for the 40x objective and 79.7% for the 20x objective. This algorithm has the potential to be the signal readout mechanism of a biochip for cell detection. (C) 2019 Elsevier Ltd. All rights reserved.