Improved Classification of Colorectal Polyps on Histopathological Images With Ensemble Learning and Stain Normalization
| dc.contributor.author | Yengec-Tasdemir, Sena Busra | |
| dc.contributor.author | Aydin, Zafer | |
| dc.contributor.author | Akay, Ebru | |
| dc.contributor.author | Dogan, Serkan | |
| dc.contributor.author | Yilmaz, Bulent | |
| dc.date.accessioned | 2025-09-25T10:48:44Z | |
| dc.date.available | 2025-09-25T10:48:44Z | |
| dc.date.issued | 2023 | |
| dc.description | Akay, Ebru/0000-0003-1190-1800; Yilmaz, Bulent/0000-0003-2954-1217 | en_US |
| dc.description.abstract | Background and Objective: Early detection of colon adenomatous polyps is critically important because correct detection of it significantly reduces the potential of developing colon cancers in the future. The key challenge in the detection of adenomatous polyps is differentiating it from its visually similar counterpart, non-adenomatous tissues. Currently, it solely depends on the experience of the pathologist. To assist the pathologists, the objective of this work is to provide a novel non-knowledge-based Clinical Decision Support System (CDSS) for improved detection of adenomatous polyps on colon histopathology images. Methods: The domain shift problem arises when the train and test data are coming from different distributions of diverse settings and unequal color levels. This problem, which can be tackled by stain normalization techniques, restricts the machine learning models to attain higher classification accuracies. In this work, the proposed method integrates stain normalization techniques with ensemble of competitively accurate, scalable and robust variants of CNNs, ConvNexts. The improvement is empirically analyzed for five widely employed stain normalization techniques. The classification performance of the proposed method is evaluated on three datasets comprising more than 10k colon histopathology images. Results: The comprehensive experiments demonstrate that the proposed method outperforms the stateof-the-art deep convolutional neural network based models by attaining 95% classification accuracy on the curated dataset, and 91.1% and 90% on EBHI and UniToPatho public datasets, respectively. Conclusions: These results show that the proposed method can accurately classify colon adenomatous polyps on histopathology images. It retains remarkable performance scores even for different datasets coming from different distributions. This indicates that the model has a notable generalization ability. (c) 2023 Elsevier B.V. All rights reserved. | en_US |
| dc.description.sponsorship | Scientific and Technological Re-search Council of Turkey (TUBITAK) [120E204] | en_US |
| dc.description.sponsorship | Acknowledgments This work was supported by the Scientific and Technological Re-search Council of Turkey (TUBITAK) under Grant 120E204. The authors would like to thank Serdal Sadet Ozcan for her valuable contribution to detailed labeling of the dataset. | en_US |
| dc.description.sponsorship | This work was supported by the Scientific and Technological Research Council of Turkey (TUBITAK) under Grant 120E204. | |
| dc.description.sponsorship | Türkiye Bilimsel ve Teknolojik Araştırma Kurumu, TÜBİTAK, (120E204); Türkiye Bilimsel ve Teknolojik Araştırma Kurumu, TÜBİTAK | |
| dc.identifier.doi | 10.1016/j.cmpb.2023.107441 | |
| dc.identifier.issn | 0169-2607 | |
| dc.identifier.issn | 1872-7565 | |
| dc.identifier.scopus | 2-s2.0-85149748805 | |
| dc.identifier.uri | https://doi.org/10.1016/j.cmpb.2023.107441 | |
| dc.identifier.uri | https://hdl.handle.net/20.500.12573/3984 | |
| dc.language.iso | en | en_US |
| dc.publisher | Elsevier Ireland Ltd | en_US |
| dc.relation.ispartof | Computer Methods and Programs in Biomedicine | en_US |
| dc.rights | info:eu-repo/semantics/closedAccess | en_US |
| dc.title | Improved Classification of Colorectal Polyps on Histopathological Images With Ensemble Learning and Stain Normalization | en_US |
| dc.type | Article | en_US |
| dspace.entity.type | Publication | |
| gdc.author.id | Akay, Ebru/0000-0003-1190-1800 | |
| gdc.author.id | Yilmaz, Bulent/0000-0003-2954-1217 | |
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| gdc.author.scopusid | 57189925966 | |
| gdc.author.wosid | Yilmaz, Bulent/Juz-1320-2023 | |
| gdc.author.wosid | Akay, Ebru/Afr-3424-2022 | |
| gdc.bip.impulseclass | C4 | |
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| gdc.coar.access | metadata only access | |
| gdc.coar.type | text::journal::journal article | |
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| gdc.description.department | Abdullah Gül University | en_US |
| gdc.description.departmenttemp | [Yengec-Tasdemir, Sena Busra] Queens Univ Belfast, Sch Elect Elect Engn & Comp Sci, Belfast BT39DT, North Ireland; [Yengec-Tasdemir, Sena Busra; Aydin, Zafer; Yilmaz, Bulent] Abdullah Gul Univ, Dept Elect & Comp Engn, TR-38080 Kayseri, Turkiye; [Aydin, Zafer] Abdullah Gul Univ, Dept Comp Engn, TR-38080 Kayseri, Turkiye; [Akay, Ebru] Kayseri City Hosp, Pathol Clin, TR-38080 Kayseri, Turkiye; [Dogan, Serkan] Kayseri City Hosp, Gastroenterol Clin, TR-38080 Kayseri, Turkiye; [Yilmaz, Bulent] Gulf Univ Sci & Technol, Dept Elect Engn, Mishref 40005, Kuwait | en_US |
| gdc.description.publicationcategory | Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı | en_US |
| gdc.description.scopusquality | Q1 | |
| gdc.description.volume | 232 | en_US |
| gdc.description.woscitationindex | Science Citation Index Expanded | |
| gdc.description.wosquality | Q1 | |
| gdc.identifier.openalex | W4321793931 | |
| gdc.identifier.pmid | 36905748 | |
| gdc.identifier.wos | WOS:000955039400001 | |
| gdc.index.type | WoS | |
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| gdc.index.type | PubMed | |
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| gdc.oaire.isgreen | true | |
| gdc.oaire.keywords | Neural Networks | |
| gdc.oaire.keywords | 610 | |
| gdc.oaire.keywords | Colonic Polyps | |
| gdc.oaire.keywords | name=SDG 3 - Good Health and Well-being | |
| gdc.oaire.keywords | Machine Learning | |
| gdc.oaire.keywords | Computer | |
| gdc.oaire.keywords | Adenomatous Polyps | |
| gdc.oaire.keywords | /dk/atira/pure/sustainabledevelopmentgoals/good_health_and_well_being | |
| gdc.oaire.keywords | Humans | |
| gdc.oaire.keywords | Neural Networks, Computer | |
| gdc.oaire.keywords | Colonic Polyps - diagnostic imaging | |
| gdc.oaire.keywords | Coloring Agents | |
| gdc.oaire.popularity | 2.1655168E-8 | |
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| gdc.oaire.sciencefields | 02 engineering and technology | |
| gdc.oaire.sciencefields | 03 medical and health sciences | |
| gdc.oaire.sciencefields | 0302 clinical medicine | |
| gdc.oaire.sciencefields | 0202 electrical engineering, electronic engineering, information engineering | |
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| gdc.opencitations.count | 23 | |
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| gdc.scopus.citedcount | 27 | |
| gdc.virtual.author | Aydın, Zafer | |
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