SYNE1 Related Cerebellar Ataxia Presents With Variable Phenotypes in a Consanguineous Family From Turkey

dc.contributor.author Yucesan, E.
dc.contributor.author Iseri, Sibel A. Ugur
dc.contributor.author Bilgic, B.
dc.contributor.author Gormez, Z.
dc.contributor.author Gungor, B. Bakir
dc.contributor.author Sarac, A.
dc.contributor.author Ozbek, U.
dc.contributor.author Ugur Iseri, Sibel A.
dc.contributor.author Bakir Gungor, B.
dc.date.accessioned 2025-09-25T10:56:46Z
dc.date.available 2025-09-25T10:56:46Z
dc.date.issued 2017-07-07
dc.description Yucesan, Emrah/0000-0003-4512-8764; Gurvit, Hakan/0000-0003-2908-8475; Ozbek, Ugur/0000-0001-5319-0547; Bakir-Gungor, Burcu/0000-0002-2272-6270; Bilgic, Basar/0000-0001-6032-0856; Ugur Iseri, Sibel Aylin/0000-0002-5790-6853 en_US
dc.description.abstract SYNE1 related autosomal recessive cerebellar ataxia type 1 (ARCA1) is a late-onset cerebellar ataxia with slow progression originally demonstrated in French-Canadian populations of Quebec, Canada. Nevertheless, recent studies on SYNE1 ataxia have conveyed the condition from a geographically limited pure cerebellar recessive ataxia to a complex multisystem phenotype that is relatively common on the global scale. To determine the underlying genetic cause of the ataxia phenotype in a consanguineous family from Turkey presenting with very slow progressive cerebellar symptoms including dysarthria, dysmetria, and gait ataxia, we performed SNP-based linkage analysis in the family along with whole exome sequencing (WES) in two affected siblings. We identified a homozygous variant in SYNE1 (NM_033071.3: c.13086delC; p.His4362GlnfsX2) in all four affected siblings. This variant presented herein has originally been associated with only pure ataxia in a single case. We thus present segregation and phenotypic manifestations of this variant in four affected family members and further extend the pure ataxia phenotype with upper motor neuron involvement and peripheral neuropathy. Our findings in turn established a precise molecular diagnosis in this family, demonstrating the use of WES combined with linkage analysis in families as a powerful tool for establishing a quick and precise genetic diagnosis of complex neurological phenotypes. en_US
dc.description.sponsorship Istanbul University [ONAP-11021]; Scientific and Technological Research Council of Turkey (TUBITAK) [BILGEMK030-T439]; Republic of Turkey Ministry of Development [2011 K120020]; Istanbul Development Agency [TR10/15/YNK/0093]; TUBITAK [113S331] en_US
dc.description.sponsorship This work was supported by the grants of Scientific Research Projects Coordination Unit of Istanbul University, the Scientific and Technological Research Council of Turkey (TUBITAK), and the Republic of Turkey Ministry of Development with grant reference numbers of ONAP-11021, UEKAE, BILGEMK030-T439, and Infrastructure Grant-2011 K120020, respectively. Biobanking support was given by Istanbul Development Agency (Project Number TR10/15/YNK/0093). EY and OO have been fellows of TUBITAK Project Number 113S331. en_US
dc.description.sponsorship Funding This work was supported by the grants of Scientific Research Projects Coordination Unit of Istanbul University, the Scientific and Technological Research Council of Turkey (TUBITAK), and the Republic of Turkey Ministry of Development with grant reference numbers of ONAP-11021, UEKAE, BILGEM K030-T439, and Infrastructure Grant-2011 K120020, respectively. Biobanking support was given by Istanbul Development Agency (Project Number TR10/15/YNK/0093). EY and OO have been fellows of TUBITAK Project Number 113S331.
dc.description.sponsorship The authors are grateful to the family for participating in this study. This work was supported by the grants of Scientific Research Projects Coordination Unit of Istanbul University, the Scientific and Technological Research Council of Turkey (TUBITAK), and the Republic of Turkey Ministry of Development with grant reference numbers of ONAP-11021, UEKAE, BILGEM K030-T439, and Infrastructure Grant-2011 K120020, respectively. Biobanking support was given by Istanbul Development Agency (Project Number TR10/15/YNK/0093). EY and OO have been fellows of TUBITAK Project Number 113S331. We highly appreciate the efforts of Monica Ann Malt, MSN, RN, and CPAN (Bezmialem Vakif University, Turkey) in language editing of this paper. The authors declare no conflict of interest. All procedures performed in studies involving human participants were in accordance with the ethical standards of the Istanbul University, Istanbul Faculty of Medicine, Clinical Ethics Committee and with the 1964 Helsinki declaration and its later amendments or comparable ethical standards. Accordingly, informed consents were obtained from all family members. The authors declare that they have no conflict of interest. This work was supported by the grants of Scientific Research Projects Coordination Unit of Istanbul University, the Scientific and Technological Research Council of Turkey (TUBITAK), and the Republic of Turkey Ministry of Development with grant reference numbers of ONAP-11021, UEKAE, BILGEM K030-T439, and Infrastructure Grant-2011 K120020, respectively. Biobanking support was given by Istanbul Development Agency (Project Number TR10/15/YNK/0093). EY and OO have been fellows of TUBITAK Project Number 113S331.
dc.description.sponsorship Acknowledgements The authors are grateful to the family for participating in this study. This work was supported by the grants of Scientific Research Projects Coordination Unit of Istanbul University, the Scientific and Technological Research Council of Turkey (TUBITAK), and the Republic of Turkey Ministry of Development with grant reference numbers of ONAP-11021, UEKAE, BILGEM K030-T439, and Infrastructure Grant-2011 K120020, respectively. Biobanking support was given by Istanbul Development Agency (Project Number TR10/15/YNK/0093). EY and OO have been fellows of TUBITAK Project Number 113S331.
dc.description.sponsorship Istanbul Faculty of Medicine, Clinical Ethics Committee; TUBITAK, (K030-T439, K120020, ONAP-11021); Istanbul Üniversitesi; Türkiye Bilimsel ve Teknolojik Araştirma Kurumu, TÜBITAK; Istanbul Kalkinma Ajansi, (TR10/15/YNK/0093); Istanbul Kalkinma Ajansi; Ministry of Innovative Development of the Republic of Uzbekistan
dc.identifier.doi 10.1007/s10072-017-3049-8
dc.identifier.issn 1590-1874
dc.identifier.issn 1590-3478
dc.identifier.scopus 2-s2.0-85022018103
dc.identifier.uri https://doi.org/10.1007/s10072-017-3049-8
dc.identifier.uri https://hdl.handle.net/20.500.12573/4605
dc.language.iso en en_US
dc.publisher Springer-Verlag Italia Srl en_US
dc.relation.ispartof Neurological Sciences en_US
dc.rights info:eu-repo/semantics/closedAccess en_US
dc.subject Autosomal Recessive Cerebellar Ataxia en_US
dc.subject Syne1 en_US
dc.subject Peripheral Neuropathy en_US
dc.subject Linkage Analysis en_US
dc.subject Whole Exome Sequencing en_US
dc.subject E. Yucesan and S. A.Ugur Iseri Contributed Equally to This Work en_US
dc.subject E. Yucesan and S. A. Ugur Iseri Contributed Equally to This Work
dc.title SYNE1 Related Cerebellar Ataxia Presents With Variable Phenotypes in a Consanguineous Family From Turkey en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.id Yucesan, Emrah/0000-0003-4512-8764
gdc.author.id Gurvit, Hakan/0000-0003-2908-8475
gdc.author.id Ozbek, Ugur/0000-0001-5319-0547
gdc.author.id Bakir-Gungor, Burcu/0000-0002-2272-6270
gdc.author.id Bilgic, Basar/0000-0001-6032-0856
gdc.author.id Ugur Iseri, Sibel Aylin/0000-0002-5790-6853
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gdc.author.wosid Ozbek, Ugur/C-9513-2017
gdc.author.wosid Hanagasi, Hasmet/Aat-9501-2020
gdc.author.wosid Ozdemir, Ozkan/Aai-9947-2021
gdc.author.wosid Iseri, Sibel/Aad-6099-2020
gdc.author.wosid Yucesan, Emrah/Abo-8565-2022
gdc.author.wosid Gurvit, Hakan/A-7646-2019
gdc.author.wosid Gormez, Zeliha/A-9557-2013
gdc.author.wosid bilgic, basar/E-4821-2012
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gdc.coar.type text::journal::journal article
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gdc.description.department Abdullah Gül University en_US
gdc.description.departmenttemp [Yucesan, E.; Iseri, Sibel A. Ugur; Ozdemir, O.; Ozbek, U.] Istanbul Univ, Aziz Sancar Inst Expt Med, Dept Genet, Istanbul, Turkey; [Yucesan, E.] Bezmialem Vakif Univ, Inst Life Sci & Biotechnol, Istanbul, Turkey; [Bilgic, B.; Gurvit, H.; Hanagasi, H.] Istanbul Univ, Dept Neurol, Behav Neurol & Movement Disorders Unit, Istanbul Fac Med, Istanbul, Turkey; [Gormez, Z.; Gungor, B. Bakir; Sarac, A.; Sagiroglu, M.] TUBITAK, Adv Genom & Bioinformat Res Ctr IGBAM, BILGEM, Kocaeli, Turkey; [Gormez, Z.] Istinye Univ, Dept Software Engn, Fac Engn, Istanbul, Turkey; [Gungor, B. Bakir] Abdullah Gul Univ, Fac Engn, Kayseri, Turkey; [Sarac, A.] TUBITAK, Genet Engn & Biotechnol Inst, Marmara Res Ctr, Kocaeli, Turkey; [Sagiroglu, M.] UEKAE, TUBITAK, BILGEM, Kocaeli, Turkey; [Ozbek, U.] Acibadem Univ, Dept Med Genet, Fac Med, Istanbul, Turkey en_US
gdc.description.endpage 2207 en_US
gdc.description.issue 12 en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q2
gdc.description.startpage 2203 en_US
gdc.description.volume 38 en_US
gdc.description.woscitationindex Science Citation Index Expanded
gdc.description.wosquality Q3
gdc.identifier.openalex W2724966365
gdc.identifier.pmid 28687974
gdc.identifier.wos WOS:000417169100019
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gdc.oaire.keywords Adult
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gdc.oaire.keywords official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology, cilt.38, ss.2203-2207, 2017 [Yucesan E., Ugur I., Bilgic B., Gormez Z., Bakir G., Sarac A., Ozdemir O., Sagiroglu M., Gurvit H., Hanagasi H., et al., -SYNE1 related cerebellar ataxia presents with variable phenotypes in a consanguineous family from Turkey.-, Neurological sciences]
gdc.oaire.keywords Cerebellar Ataxia
gdc.oaire.keywords Turkey
gdc.oaire.keywords Siblings
gdc.oaire.keywords Nuclear Proteins
gdc.oaire.keywords Nerve Tissue Proteins
gdc.oaire.keywords Whole Exome Sequencing
gdc.oaire.keywords Diagnosis, Differential
gdc.oaire.keywords Consanguinity
gdc.oaire.keywords Cytoskeletal Proteins
gdc.oaire.keywords Phenotype
gdc.oaire.keywords Syne1
gdc.oaire.keywords Autosomal Recessive Cerebellar Ataxia
gdc.oaire.keywords E. Yucesan And S. A.Ugur Iseri Contributed Equally To This Work
gdc.oaire.keywords Linkage Analysis
gdc.oaire.keywords Humans
gdc.oaire.keywords Female
gdc.oaire.keywords Peripheral Neuropathy
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gdc.oaire.sciencefields 03 medical and health sciences
gdc.oaire.sciencefields 0302 clinical medicine
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gdc.opencitations.count 9
gdc.plumx.crossrefcites 2
gdc.plumx.mendeley 23
gdc.plumx.pubmedcites 5
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