Evaluation of Selected Plant Phenolics Via Beta-Secretase Inhibition, Molecular Docking, and Gene Expression Related to Alzheimer's Disease

dc.contributor.author Akyurek, Tugba Ucar
dc.contributor.author Orhan, Ilkay Erdogan
dc.contributor.author Deniz, F. Sezer Senol
dc.contributor.author Eren, Gokcen
dc.contributor.author Acar, Busra
dc.contributor.author Sen, Alaattin
dc.contributor.author Şenol Deniz, F. Sezer
dc.contributor.author Uçar Akyürek, Tugba
dc.date.accessioned 2025-09-25T10:46:39Z
dc.date.available 2025-09-25T10:46:39Z
dc.date.issued 2024
dc.description Eren, Gokcen/0000-0002-3420-607X; Acar, Busra/0000-0002-4772-2698; Sen, Alaattin/0000-0002-8444-376X; Senol Deniz, Fatma Sezer/0000-0002-5850-9841; Erdogan Orhan, Ilkay/0000-0002-7379-5436; en_US
dc.description.abstract Background: The goal of the current study was to investigate the inhibitory activity of six phenolic compounds, i.e., rosmarinic acid, gallic acid, oleuropein, epigallocatechin gallate (EGCG), 3-hydroxytyrosol, and quercetin, against beta-site amyloid precursor protein cleaving enzyme-1 (BACE1), also known as beta-secretase or memapsin 2, which is implicated in the pathogenesis of Alzheimer's disease (AD). Methods and Results: The inhibitory potential against BACE1, molecular docking simulations, as well as neurotoxicity and the effect on the AD-related gene expression of the selected phenolics were tested. BACE1 inhibitory activity was carried out using the ELISA microplate assay via fluorescence resonance energy transfer (FRET) technology. Molecular docking experiments were performed in the human BACE1 active site (PDB code: 2WJO). Neurotoxicity of the compounds was carried out in SH-SY5Y, a human neuroblastoma cell line, by the Alamar Blue method. A gene expression analysis of the compounds on fourteen genes linked to AD was conducted using the real-time polymerase chain reaction (RT-PCR) method. Rosmarinic acid, EGCG, oleuropein, and quercetin (also used as the reference) were able to inhibit BACE1 with their respective IC50 values 4.06 +/- 0.68, 1.62 +/- 0.12, 9.87 +/- 1.01, and 3.16 +/- 0.30 mM. The inhibitory compounds were observed to occupy the non-catalytic site of the BACE1. However, hydrogen bonds were found to be present between rosmarinic acid and EGCG and aspartic amino acid D228 in the catalytic site. Oleuropein and quercetin effectively suppressed the expression of PSEN, APOE, and CLU, which are recognized to be linked to the pathogenesis of AD. Conclusions: The outcomes of the work bring quercetin, EGCG, and rosmarinic acid to the forefront as promising BACE1 inhibitors. en_US
dc.description.sponsorship Scientific Research Project Unit of Gazi University (Ankara, Turkiye) [02/2019-31]; Turkish Academy of Sciences (TUBA) en_US
dc.description.sponsorship This research (02/2019-31) was funded by the Scientific Research Project Unit of Gazi University (Ankara, Turkiye). The partial financial support for this work was also provided from general annual research allowance by the Turkish Academy of Sciences (TUBA) allocated to IEO. en_US
dc.description.sponsorship Gazi Üniversitesi; Türkiye Bilimler Akademisi
dc.identifier.doi 10.3390/ph17111441
dc.identifier.issn 1424-8247
dc.identifier.scopus 2-s2.0-85210424571
dc.identifier.uri https://doi.org/10.3390/ph17111441
dc.identifier.uri https://hdl.handle.net/20.500.12573/3803
dc.language.iso en en_US
dc.publisher MDPI en_US
dc.relation.ispartof Pharmaceuticals en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject Alzheimer's Disease en_US
dc.subject Beta Secretase en_US
dc.subject Cytotoxicity en_US
dc.subject Gene Expression en_US
dc.subject Molecular Docking en_US
dc.subject Neuroprotection en_US
dc.subject Phenolic Compounds en_US
dc.subject Alzheimer’s Disease
dc.title Evaluation of Selected Plant Phenolics Via Beta-Secretase Inhibition, Molecular Docking, and Gene Expression Related to Alzheimer's Disease en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.id Eren, Gokcen/0000-0002-3420-607X
gdc.author.id Acar, Busra/0000-0002-4772-2698
gdc.author.id Sen, Alaattin/0000-0002-8444-376X
gdc.author.id Senol Deniz, Fatma Sezer/0000-0002-5850-9841
gdc.author.id Erdogan Orhan, Ilkay/0000-0002-7379-5436
gdc.author.id Ucar akyurek, Tugba/0000-0003-3105-8494
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gdc.author.wosid Sen, Alaattin/H-3463-2011
gdc.author.wosid Orhan, Ilkay Erdogan/H-6092-2011
gdc.author.wosid Eren, Gokcen/A-9274-2018
gdc.author.wosid Senol Deniz, Fatma Sezer/Aag-5636-2019
gdc.author.wosid Senol Deniz, F./Aag-5636-2019
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gdc.description.department Abdullah Gül University en_US
gdc.description.departmenttemp [Akyurek, Tugba Ucar; Orhan, Ilkay Erdogan; Deniz, F. Sezer Senol] Gazi Univ, Dept Pharmacognosy, Fac Pharm, Ankara 06330, Turkiye; [Orhan, Ilkay Erdogan] Lokman Hekim Univ, Fac Pharm, Dept Pharmacognosy, TR-06510 Ankara, Turkiye; [Eren, Gokcen] Gazi Univ, Fac Pharm, Dept Pharmaceut Chem, TR-06330 Ankara, Turkiye; [Acar, Busra; Sen, Alaattin] Abdullah Gul Univ, Fac Life & Nat Sci, Dept Mol Biol & Genet, TR-38080 Kayseri, Turkiye; [Sen, Alaattin] Pamukkale Univ, Fac Sci, Dept Biol, TR-20070 Denizli, Turkiye en_US
gdc.description.issue 11 en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q2
gdc.description.startpage 1441
gdc.description.volume 17 en_US
gdc.description.woscitationindex Science Citation Index Expanded
gdc.description.wosquality Q1
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gdc.oaire.keywords RS1-441
gdc.oaire.keywords Pharmacy and materia medica
gdc.oaire.keywords beta secretase
gdc.oaire.keywords gene expression
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gdc.oaire.keywords cytotoxicity
gdc.oaire.keywords Medicine
gdc.oaire.keywords neuroprotection
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gdc.virtual.author Acar, Büşra
gdc.virtual.author Şen, Alaattin
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