Scopus İndeksli Yayınlar Koleksiyonu
Permanent URI for this collectionhttps://hdl.handle.net/20.500.12573/395
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Article Citation - WoS: 2Citation - Scopus: 2A Novel Biomass-Derived Reductant for Nitric Acid Dissolution of Manganiferous Iron Ore: Comparative Assessment of Organic Reductants(MDPI, 2025-12-31) Top, Soner; Altiner, Mahmut; Vapur, Huseyin; Kursunoglu, Sait; Stopic, SreckoThis study investigates the selective dissolution of manganese from a manganiferous iron ore using nitric acid (HNO3) in the presence of various organic reductants. A series of leaching experiments was performed to evaluate the effects of temperature, reductant type, and leaching time on Mn recovery, with particular emphasis on biomass (horse dung) and tartaric acid as novel reducing agents. The dissolution behaviour of Fe, Mn, Mg, Ca, and Al was systematically examined, revealing that Mn extraction was strongly enhanced in the presence of reductants, while Fe dissolution remained below 10% under all conditions. The maximum Mn dissolution exceeded 90% at 90 degrees C using biomass and reached nearly 85%-90% with tartaric acid at elevated temperatures. Kinetic studies were conducted by applying reaction order models and the shrinking core model. The results indicated that Mn dissolution in HNO3 medium is predominantly controlled by surface chemical reaction, with Arrhenius analysis yielding activation energies of 27.74 kJ/mol for biomass and 21.26 kJ/mol for tartaric acid. These relatively low values confirm the efficiency of organic reductants in facilitating Mn reduction and dissolution. To sum up, comparison of reductant efficiency revealed that, at the lowest concentrations, the dissolution of Mn followed the sequence glucose > sucrose > oxalic acid > tartaric acid > maleic acid > biomass > citric acid > acetic acid. At the highest concentrations, the trend shifted, with citric acid emerging as the most effective, followed by tartaric acid > oxalic acid > glucose > sucrose > maleic acid > biomass > acetic acid.Article Citation - WoS: 1Citation - Scopus: 1Unit Sizing and Feasibility Analysis of Green Hydrogen Storage Utilizing Excess Energy for Energy Islands(MDPI, 2026-01-14) Koca, Kemal; Dursun, Erkan; Bekci, Eyup; Ucar, Suat; Akpolat, Alper Nabi; Tsami, Maria; Borg, Ruben PaulThis study examines whether green hydrogen production using combined wind and solar energy on Marmara Island can meet the island's electricity demand and fuel the fuel needs of a hydrogen-powered ferry. A hybrid system consisting of a 10 MW wind farm, a 3 MW solar PV system, and a PEM electrolyzer sized to meet the island's hydrogen demand was modeled for the island, located in the southwestern Sea of Marmara. The hydrogen production potential, energy flows, and techno-economic performance were evaluated using HOMER-Pro 3.18.4 version. According to the simulation results, the hybrid system generates approximately 62.6 GWh of electricity annually, achieving an 82.8% renewable energy share. A significant portion of the produced energy is transferred to the electrolyzer, producing approximately 729 tons of green hydrogen annually. The economic analysis demonstrates that the system is financially viable, with a net present cost of USD 61.53 million and a levelized energy cost of USD 0.175/kWh. Additionally, the design has the potential to reduce approximately 2637 tons of CO2 emissions over a 25-year period. The results demonstrate that integrating renewable energy sources with hydrogen production can provide a cost-effective and low-carbon solution for isolated communities such as islands, strengthening energy independence and supporting sustainable transportation options. It has been demonstrated that hydrogen produced by PEM electrolyzers powered by excess energy from the hybrid system could provide a reliable fuel source for hydrogen-fueled ferries operating between Marmara Island and the mainland. Overall, the findings indicate that pairing renewable energy generation with hydrogen production offers a realistic pathway for islands seeking cleaner transportation options and greater energy independence.Article Seismic Site Classification via Vs30 and SPT-N Values in Antakya City, Türkiye(Taylor & Francis Ltd, 2026-01-22) Alosman, Salama Omar; Akin, Muge K.; Cabalar, Ali FiratThe paper presents an assessment for the seismic site classification (SSC) in Antakya city located in southern central T & uuml;rkiye, strongly affected by three destructive earthquakes of 7.7 Mw took place in Pazarcik (Kahramanmaras) on February 6, 2023, 7.6 Mw took place in Elbistan (Kahramanmaras) on February 6, 2023, and 6.4 Mw took place in Defne (Hatay) on February 20, 2023. The V-S30 and SPT-N values have been used to identify the SSC in the region with respect to the provisions recommended by the National Earthquake Hazards Reduction Program (NEHRP), Design of Structures for Earthquake Resistance (Eurocode 8), and Turkish Building Earthquake Code (TBEC). The values of SPT-N were recorded from the field works that include 630 boreholes in the top 30 m, whilst the V-S30 was calculated through the multichannel analysis of surface waves (MASW) method performed at 977 different locations across the region. The results showed that approximately 51% and 44% of soils in the city of Antakya has been classified as Class C and Class D, respectively, in accordance with the NEHRP and TBEC, whilst 52% and 44% of the same region has been classified as Class B and Class C, respectively, in accordance with the Eurocode 8. Furthermore, a newly proposed correlation as well as already available ones between the V-S30 and SPT-N values have been presented comparatively by an extensive series of GIS maps produced in order to have a much clear understanding on the various soil types in Antakya. Evidently, the results of this research should be of a great significance for researchers and practitioners working on the earthquake-resistant structures, prediction of ground movements, and in seismic risk assessments.Article Depositional Model, Cyclicity, and Hydrocarbon Potential of the Eocene Sakesar Carbonate Ramp, Salt Range, Pakistan(Springer, 2026-02-02) Shah, Syed Bilawal Ali; Shah, Syed Haider AliThe Sakesar Formation in the Salt Range, Pakistan, represents a well-developed Eocene carbonate ramp deposited along the southern Tethyan margin. This study integrates petrographic analysis, palynofacies evaluation, organic geochemical measurements and sequence stratigraphic interpretation to characterise the depositional environments, diagenetic evolution, and petroleum system potential of the formation. Six microfacies (MF1-MF6) were identified through thin-section petrography ranging from high-energy shoal grainstones to low-energy lagoonal marls. Quantitative palynofacies analysis shows energy dependent trends in organic matter composition, with shoal facies dominated by opaque phytoclasts and lagoonal facies enriched in amorphous organic matter (AOM). Organic geochemical measurements including Total Organic Carbon (TOC), Hydrogen Index (HI), Oxygen Index (OI), and Rock-Eval pyrolysis parameters, combined with vitrinite reflectance (Ro) data, indicate that lagoonal marl-micrite facies (MF6) contain Type II kerogen with the highest TOC values (2.80%), elevated HI (293 mg hydrocarbons per gram TOC), and peak oil-window maturity (0.72% Ro). These attributes identify MF6 as the primary oil-prone source rock. Mid-ramp wackestones and packstones (MF3-MF4) possess moderate generative potential and serve as internal seals or baffles, whereas high-energy shoal facies (MF1-MF2) show favourable reservoir characteristics but limited source potential. Sequence-stratigraphic analysis demonstrates that maximum flooding surfaces (MFS) frequently coincide with organic-rich MF6 intervals, producing predictable vertical stacking of source, seal, and reservoir units at parasequence scale. The integrated petrographic, palynofacies, and geochemical framework confirms the dual role of the Sakesar Formation as both a reservoir and a source-seal interval, with metre-scale cyclicity enhancing hydrocarbon charge and trapping efficiency. These findings refine the depositional and petroleum system model of the Sakesar carbonate ramp and provide valuable predictive analogues for Eocene carbonate exploration within the Himalayan foreland basin and related Tethyan settings.Article Enhanced Photoluminescence and Stability of CsPbBr3 Perovskite Nanocrystals Through AuCl Doping(Springer, 2026-02) Khorasani, Azam; Mutlugun, EvrenThis study delves into the transformative effects of inorganic gold chloride (AuCl) doping on all-inorganic cesium lead bromide (CsPbBr3) colloidal perovskite quantum dots (PeQDs). Using a precise hot injection synthesis method, AuCl was introduced at concentrations ranging from 0 to 10%, enabling a comprehensive analysis of its impact on the structural, morphological, and optical characteristics of CsPbBr3 PeQDs. We systematically investigated how varying AuCl levels influence photoluminescence (PL), PL quantum yield (PLQY), and the stability of these quantum dots. Advanced characterization techniques, including X-ray diffraction (XRD), scanning transmission electron microscopy (STEM), energy dispersive X-ray analysis (EDX), Fourier-transform infrared spectroscopy (FTIR), UV-Vis absorption, steady-state PL, absolute PL measurement, and time-resolved PL (TRPL), provided a detailed insight into these changes. Our findings indicate that AuCl doping is successfully integrated into CsPbBr3 PeQDs, with 5% identified as the optimal concentration. At this level, the quantum dots show enhanced PLQY, superior crystallinity, and increased stability at 50 degrees C and in ethanol solvent compared to undoped samples. While higher doping levels reduce QY and PL slightly, they still outperform the undoped CsPbBr3 PeQDs. These results demonstrate that AuCl doping can fine-tune the structural and optical properties of CsPbBr3 PeQDs, marking a significant step forward in developing tailored materials for advanced optoelectronic applications.Article Performance Boost in QLEDs Using Octanethiol-Capped Core/Shell Quantum Dots(IOP Publishing Ltd, 2026-01-07) Yazici, Ahmet F.; Yuruc, Adnan M.; Kelestemur, Yusuf; Serin, Ramis Berkay; Kacar, Rifat; Ulku, Alper; Mutlugun, EvrenQuantum dots attract significant attention as one of the most promising colloidal nanocrystals with unique optical properties and potential applications for the next generation of display technology. In this paper, we evaluate the performance of CdZnSeS-based alloyed-shell quantum dots (QDs) for electroluminescence devices upon additional shell growth and ligand exchange. This includes core/shell (C/S) and core/shell/shell (C/S/S) QDs, whose latter includes an additional ZnS shell and octanethiol (OT) ligands. We present detailed characterizations of QDs using transmission electron microscopy, XRD, and various spectroscopic techniques and demonstrate their QD light emitting (QLEDs). We find the photoluminescence quantum yield of C/S/S QDs increased from 68.8% to 88.7% compared to C/S QDs whereas the emission linewidth narrows from 22.2 nm to 20.8 nm. QLEDs fabricated with C/S/S QDs exhibit a higher peak external quantum efficiency (EQE) of 4.1% and maximum luminance of 85 000 cd m-2, compared to 2.3% EQE and 67 000 cd m-2 for C/S QLEDs. In this respect, the OT-assisted shell growth significantly improves the optical property of QDs and performance of QLEDs, likely attributed to the enhanced charge balance and increased radiative recombination rate.Article A Small Indole Derivative Isolated From Caper (Capparis Ovata) as an Inducer of P53-Mediated Apoptosis in Prostate Cancer: Comprehensive In Vitro and In Silico Studies(Wiley, 2025-12-31) Acar, Ozden Ozgun; Gazioglu, Isil; Oruc, Hatice; Kale, Elif; Senol, Halil; Topcu, Gulacti; Sen, AlaattinNatural products with stunning chemical diversity have been extensively researched for their anticancer potential for more than fifty years. This study aimed to determine the effect of indole derivative 1H-indole-2-hydroxy-3-carboxylic acid (IHCA), isolated as a novel alkaloid from Capparis ovata, on selected tumor suppressor, apoptotic, and cell cycle regulatory genes, which are known to be important in cancer pathophysiology, on Caco-2 and LNCaP cells in comparison with Taxol. The molecular mechanism of IHCA's anticancer activity is essentially undefined. Different concentrations of IHCA increased the expression levels of apoptosis-related genes, including BCL-2 and TNF-alpha. In addition, the tumor suppressor genes PTEN, P53, and RB were increased in LNCaP and Caco-2 cells. KRAS, an oncogenic gene, was significantly downregulated by IHCA in LNCaP cells. Western blot results showed that the protein expression levels of P53 and PTEN in LNCaP cells were increased when treated with IHCA, whereas CDK4 and TNF-alpha were decreased. Finally, IHCA and doxorubicin significantly increased P53-driven luciferase activity compared to the control. The results strongly suggest that the novel natural compound IHCA has an anticancer effect involving the regulation of the P53 gene and its networks in vitro. The molecular docking and MD simulation analyses reveal that IHCA exhibits superior binding potential to the MDM2 protein compared to Nutlin-3a. MD simulations further confirm that IHCA maintains a more stable and consistent interaction with MDM2, as indicated by lower RMSD values and reduced ligand fluctuation. These results highlight IHCA's potential as a more effective MDM2 inhibitor, suggesting its promise as a lead compound for anticancer drug development.Clinical Trial Registration: Not applicable.Editorial Advances in Natural Building and Construction Materials(MDPI, 2025-12-16) Strzalkowski, Pawel; Sousa, Luis; Koken, Ekin; Strzałkowski, PawełArticle G-C3N4@Fe3O4 Nanomaterial Synthesis for Magnetic Solid-Phase Extraction and Photocatalytic Removal of Basic Blue 3(Springer Heidelberg, 2025-12-16) Kizil, Nebiye; Kayaci, Nilgun; Erbilgin, Duygu Erkmen; Yola, Mehmet Lutfi; Yilmaz, Erkan; Soylak, MustafaThe present research synthesized a g-C3N4@Fe3O4 hybrid material for efficient magnetic solid-phase extraction (MSPE) and photocatalytic degradation of Basic Blue 3 (BB3) dye from wastewater. Characterization of the synthesized g-C3N4@Fe3O4 was conducted through Fourier transform infrared spectroscopy (FTIR), X-ray diffraction (XRD), scanning electron microscopy (SEM), and energy-dispersive X-ray spectroscopy (EDX). The optimization of the method was carried out by examining parameters such as pH, g-C3N4@Fe3O4 amount, sample volume, and adsorption/desorption duration. In addition, analytical performance criteria such as limit of detection (LOD), limit of quantification (LOQ), and relative standard deviation (RSD) of the MSPE method were calculated as 1.29 mu g L-1, 4.28 mu g L-1, and 1.9%, respectively. The method was applied to real samples, including wastewater and textiles, and validated through addition/recovery studies for the magnetic solid-phase extraction procedure. The recoveries were gained between 91 and 100%. The reusability synthesized g-C3N4@Fe3O4 was also evaluated. The recoveries for Basic Blue 3 dye decreased to 81% after the fourth experiment. Furthermore, the photocatalytic performance of the g-C3N4@Fe3O4 hybrid material was evaluated due to its good surface area and strong interaction with Basic Blue 3 dye. The photocatalytic activity of g-C3N4@Fe3O4 hybrid material was calculated as 96.8% for 100 mg in 300 min.Article G-S a Prior Biological Knowledge-Based Pattern Detection and Enrichment Framework for Multi-Omics Data Integration(MDPI, 2025-11-29) Unlu Yazici, Miray; Bakir-Gungor, Burcu; Yousef, MalikThe rapid advancements in high-throughput technologies have led to a dramatic increase in diverse -omics data types, enabling comprehensive analyses, especially for complex diseases like cancer. Despite the development of multi-omics approaches, the challenges of scaling integration to massive, heterogeneous -omics datasets suggest that novel computational tools need to be designed. In this study, we propose an approach for integrating microRNA (miRNA) and messenger RNA (mRNA) expression data, incorporating prior biological knowledge (PBK). This approach scores and ranks groups of miRNAs and their associated genes using cross-validation iterations. The proposed method incorporates a Pattern detection (P) component to identify molecular motifs unique to each biological group. The analysis also facilitates the visualization of the groups, facilitating the identification of co-occurring groups and their characteristic features across iterations. Furthermore, the groups are scored using an over-representation analysis through a new Enrichment (E) component in each iteration. The clusters of the groups based on the Enrichment Scores (ESs) are visualized in a heatmap to obtain novel insights into the collective behavior and dependencies of the groups, aiming to understand the molecular mechanisms of complex diseases. The developed G-S-M-E tool not only provides performance metrics and biological scores at the group level but also offers comprehensive insights into intricate multi-omics interactions. In summary, our study emphasizes the importance of mathematical and data science methodologies in elucidating intricate multi-omics integration, yielding a formalized approach that deepens our comprehension of complex diseases.