Scopus İndeksli Yayınlar Koleksiyonu
Permanent URI for this collectionhttps://hdl.handle.net/20.500.12573/395
Browse
256 results
Search Results
Conference Object Citation - Scopus: 2miRcorrNetPro: Unraveling Algorithmic Insights Through Cross-Validation in Multi-Omics Integration for Comprehensive Data Analysis(Institute of Electrical and Electronics Engineers Inc., 2023-12-05) Ünlü Yazici, Miray; Yousef, Malik; Marron, J. S.; Bakir-Güngör, Burcu; Yazici, Miray UnluHigh throughput -omics technologies facilitate the investigation of regulatory mechanisms of complex diseases. Along this line, scientists develop promising tools and methods to extend our understanding at the molecular and functional levels. To this end, miRcorrNet tool performs integrative analysis of MicroRNA (miRNA) and gene expression profiles via machine learning (ML) approach to identify significant miRNA groups and their associated target genes. In this study, we propose miRcorrNetPro tool, which extends miRcorrNet by tracking group scoring, ranking and other information through the cross-validation iterations. Heatmap visualizations enable deep novel insights into the collective behavior of clusters of groups in cellular signaling and hence facilitate detection of potential biomarkers for the disease under investigation. Although miRcorrNetPro is designed as a generic tool, here we present our findings and potential miRNA biomarkers for Breast Cancer (BRCA). The miRcorrNetPro tool and all other supplementary files are available at https://github.com/Miray-Unlu/miRcorrNetPro. © 2024 Elsevier B.V., All rights reserved.Article Citation - Scopus: 2Zeolite Synthesis by Alkali Fusion Method Using Two Different Fly Ashes Derived From Turkish Thermal Power Plants(Chamber of Mining Engineers of Turkey, 2020-03-01) Top, S.; Vapur, HüseyinIn this study, Faujasite (Na-LSX) (3.5(Ca0.3)3.5(Na0.6)3.5(Mg0.1)Al7Si17O48 32(H2O)) type zeolites and Ca-Filipsite (CaK0.6Na0.4Si5.2Al2.8O16 6(H2O)) type zeolites were produced from Sugözü Thermal Power Plant and Çatalaǧzi Thermal Power Plant fly ashes by alkali fusion method followed by water leaching, respectively. In these methods, fly ashes and sodium hydroxide (NaOH) were mixed in certain proportions and sintered at 600°C in ash furnace. Then, zeolites were obtained from the ground materials after water leaching and solid/liquid separation, respectively. Cation Exchange Capacity (CEC), X-Ray Diffraction (XRD), Scanning Electron Microscopy (SEM), Fourier-Transform Infrared Spectroscopy (FTIR), X-Ray Fluorescence (XRF) and Atomic Absorption Spectrometer (AAS) analyses were used to characterize the synthesized zeolites. The zeolites synthesized with Sugözü fly ashes in a ratio of 1:2 had 136.93 meq/100 g CEC, whereas the CEC of synthesized zeolite from Çatalaǧzi fly ashes was found to be 247.88 meq/100 g. As a result, zeolites, which can be used as wastewater treatment agent, energy storage material, catalyst and separator, were synthesized by using 2 different Class F fly ash. © 2023 Elsevier B.V., All rights reserved.Book Part Citation - WoS: 5Citation - Scopus: 5Wireless MEMS for Smart Grids(Woodhead Publ Ltd, 2017) Tuna, G.; Gungor, V. C.; Dursun, B.Article Citation - Scopus: 6Wind Turbine Inspection With Drone: Advantages and Disadvantages(Erol Kurt, 2023-03-31) Tanrıverdi, Harun; Karakuş, Güzide; Ulukan, AhmetThe facilities on wind energy generation are increasingly finding usage areas in line with the ecologically friendly energy generation approach. One of the important activities of wind power generation facilities, which have high investment cost, low operating cost and low environmental impact is the maintenance and repair of wind turbines. A preventive maintenance approach is dominant to reduce maintenance times and eliminate lost time in wind turbines. Damage inspection of turbines has been evolved from tower crane access, rope access, camera viewing, and other applications to image with manual drones over the years. However, when these methods are evaluated within the framework of criteria such as cost, performance, occupational safety and data reliability, they are still insufficient and the need for inspection with autonomous drones arises. The advantages and disadvantages of autonomous drones used in the determination of damage in wind turbines are analyzed and the results are considered to contribute to the practitioners operating in the sector and academicians working in the field. © 2023 Elsevier B.V., All rights reserved.Article Citation - WoS: 7Citation - Scopus: 8Using Students' Performance to Improve Ontologies for Intelligent E-Learning System(Edam, 2015) Icoz, Kutay; Sanalan, Vehbi A.; Cakar, Mehmet Akif; Ozdemir, Esra Benli; Kaya, SukruOntologies have often been recommended for E-learning systems, but few efforts have successfully incorporated student data to represent knowledge conceptualizations. Defining key concepts and their relations between each other establishes the backbone of our E-learning system. The system guides an individual student through his/her course by evaluating their progress and suggesting instructional material to review based upon their answers. Three main tasks are performed within this framework: building ontologies for the course, measuring a student's understanding level for the concepts, and making personal suggestions to create an individualized learning environment. This paper presents: the integration of ontologies, assisted with student data, together with an intelligent Recommendation Module for the development of an E-learning system; the comparison and correction adaption of ontology from students' mind maps; and the assessment of students' actual weaknesses in comparison to what Recommendation Module suggests. The sample of 127 students, five classrooms, was conveniently selected among seventh grade students of a demographically average school in a major city in Turkey. The students' achievement was assessed and the scores for different questions were investigated for associations with concepts made in the students' minds. The results provided significant correlations among scores, and a fit model for the concepts represented by questions. The student suggested model slightly differed from the ontology map from the experts. Based on the data-supported model, the Recommendation Module more accurately determined the students' learning deficiencies and suggested concepts to be reviewed.Book Part Citation - WoS: 1Citation - Scopus: 4Understanding Communication via Diffusion: Simulation Design and Intricacies(Springer International Publishing AG, 2017) Acar, Bilal; Akkaya, Ali; Genc, Gaye; Yilmaz, H. Birkan; Kuran, M. Sukru; Tugcu, Tuna; Şükrü Kuran, M.Understanding Communication via Diffusion (CvD) is key to molecular communications research since it dominates the movement at the nano-scale. The researcher needs to properly understand the random diffusion of the molecules for the analysis of a molecular communication system. This chapter aims explaining the dynamics of diffusion from a communication engineer's perspective as well as providing useful hints for an effective simulation design by discussing some key intricacies. The chapter starts with a brief survey of simulators for molecular communications, followed by the basics of the simulation of Brownian motion and CvD. Several intricacies are addressed to help the researcher in simulation design, such as the number of replications required in terms of movement and bit sequence. We utilize this information further by discussing the design of more complex CvD systems such as tunnel-based approach that utilizes destroyer molecules and distributed simulator design based on HLA. Introduction of more complex CvD systems provides significant improvements in data rate and communications in general, bridging the gap between human-scale and nano-scale systems and enabling nanonetworking as a viable technology.Conference Object Twist-Bend Instability of a Cantilever Beam Subjected to an End Load via Homotopy Perturbation Method(Amer Inst Physics, 2018) Yucesoy, Ahmet; Coskun, Safa Bozkurt; Atay, Mehmet Tarik; Cesoy, AhmetIn this article, twist-bend buckling analysis of a cantilever beam subjected to a concentrated end load is conducted using Homotopy Perturbation Method (HPM). Even in the linear stability analysis, obtaining an exact solution for some cases is not an easy task. However, by the use of HPM this difficulty can be overcome easily. This issue is presented with a case study and the results show that HPM can be used successfully in the analysis of twist-bend buckling of beams.Article Citation - Scopus: 22Transition Towards the Sustainable Development: Unraveling the Effects of Mineral Markets, Belt & Road Initiative, and the Paris Agreement on Green Economic Growth(Elsevier Ltd, 2024-04) Xia, Xiqiang; Chishti, Muhammad Zubair; Dogan, EyupThe Agenda 2030 strongly emphasizes implementing effective and equitable measures to address the urgent challenge of global warming, primarily driven by unsustainable fossil-fuel combustion, and one of its core focuses is Sustainable Development Goal (SDG) – 8, among others. In light of this, the recent article aims to explore the dynamic nexus between minerals (MNR), the Belt and Road Initiative (BRI), the Paris Agreement (PA), green technologies (GT), and green growth, with a specific focus on developing a policy framework for advancing SDG – 8. The study utilizes daily data and advanced econometric tools such as QVAR, Cross-quantileogram, and wavelet-quantile correlation to examine the diverse effects of these factors on green growth across various time horizons. The short-run analysis reveals that MNR, BRI, and GT discourage green growth under most market conditions, except for a few quantiles that exhibit positive or insignificant relationships. In the medium run, impacts are mixed, with both positive and negative effects observed. However, in the long run, MNR, BRI, and GT consistently demonstrate favorable effects on green growth. For PA, short and medium-run effects are mixed, but medium-run results indicate a predominantly positive impact on green growth. In the long run, PA significantly benefits green growth across the majority of market conditions. Overall, the diversified results suggest that minerals, BRI, the Paris Agreement, and green technologies play a crucial role in stimulating green growth to achieve SDG - 8 in the long term. © 2024 Elsevier B.V., All rights reserved.Conference Object Citation - Scopus: 1Traffic Light Management Systems Using Reinforcement Learning(Institute of Electrical and Electronics Engineers Inc., 2022-09-07) Can, Sultan Kubra; Thahir, Adam Rizvi; Cos¸kun, Mustafa; Güngör, Vehbi Çağrı; Coskun, MustafaWhile reducing traffic congestion and decrease the number of traffic accidents in the intersections, most of the traffic light management approaches cannot adapt well to fast changing traffic dynamics and growing demands of the intersections with modern world developments. To overcome this problem, adaptive traffic controllers are developed, and detectors and sensors are added to systems to enable adoption and dynamism. Recently, reinforcement learning has shown its capability to learn the dynamics of complex environments, such as urban traffic. Although it was studied in single junction systems, one of the problems was the lack of consistency with how the real world system works. Most of the systems assume that the environment is fully observable or actions would be freely executed using simulators. This study aims to merge usefulness of reinforcement learning methods with real-world traffic constraints. Comparative performance evaluations show that the reinforcement learning algorithm (Advantage Actor-Critic (A2C)) converges well while staying stable under changing traffic dynamics. © 2022 Elsevier B.V., All rights reserved.Conference Object Citation - Scopus: 1Three-Dimensional Imaging in Degraded Visual Field(IOP Publishing Ltd, 2016-04) Oran, A.; Ozharar, S.; Ozdur, I.Imaging at degraded visual environments is one of the biggest challenges in today's imaging technologies. Especially military and commercial rotary wing aviation is suffering from impaired visual field in sandy, dusty, marine and snowy environments. For example during landing the rotor churns up the particles and creates dense clouds of highly scattering medium, which limits the vision of the pilot and may result in an uncontrolled landing. The vision in such environments is limited because of the high ratio of scattered photons over the ballistic photons which have the image information. We propose to use optical spatial filtering (OSF) method in order to eliminate the scattered photons and only collect the ballistic photons at the receiver. OSF is widely used in microscopy, to the best of our knowledge this will be the first application of OSF for macroscopic imaging. Our experimental results show that most of the scattered photons are eliminated using the spatial filtering in a highly scattering impaired visual field. The results are compared with a standard broad area photo detector which shows the effectiveness of spatial filtering.