Scopus İndeksli Yayınlar Koleksiyonu
Permanent URI for this collectionhttps://hdl.handle.net/20.500.12573/395
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Conference Object Generating Lost Urban Fabric: Exploration of Generative Adversarial Networks as a Design Tool in Post-Disaster Urban Recovery(Education and Research in Computer Aided Architectural Design in Europe, 2025) Takış, F.N.; Akyüz, S.This study investigates the use of GANs, particularly the Pix2PixHD, for reconstructing urban fabric and preserving urban memory in post-disaster contexts, focusing on Hatay, Türkiye, after the 2023 earthquakes. Models were trained on pre-disaster urban maps and tested on incomplete post-earthquake data to regenerate damaged urban areas. Evaluation metrics, including FID scores, SSIM values, and visual inspections, demonstrated the model's ability to produce contextually accurate designs. The trained model effectively maintained road networks, building geometries, and spatial coherence. In addition to spatial consistency, the model produced outputs with sharp edges and high visual clarity. These results highlight the significant potential of GANs as generative design tools, offering valuable support to urban planners and architects in balancing urgent reconstruction needs with the long-term preservation of urban identity and memory in disaster-affected areas. © 2025, Education and research in Computer Aided Architectural Design in Europe. All rights reserved.Article Citation - Scopus: 5University Librarians’ Perceptions Of Artificial Intelligence, Its Application Areas İn Libraries, And The Future(University and Research Librarians Association (UNAK), 2024-12-26) Cuhadar, S.; Mert, S.; Gezer, Ç.; Helvacioğlu, E.; Arus, O.; Aslan, Ö.; Atli, S.; Gurdal, Gultekin; Erken, MehmetToday, libraries are among the institutions affected by changing technology and innovations. The popularization of artificial intelligence (AI) technologies has also begun to transform library services. In this research, a survey was conducted to determine the adjustments that university libraries in Turkey have made and plan to make during the development process of AI technologies and applications, and to identify the services they have developed specific to the relevant period. The survey was carried out with the participation of 111 university library managers from 208 university libraries in Turkey. Through the analysis of the data, the status, knowledge, and awareness levels of university libraries regarding AI technologies and applications were determined, and measures and recommendations were presented to improve deficiencies and weaknesses. This research is the first and most comprehensive study conducted in Turkey by obtaining opinions and suggestions from university library managers on artificial intelligence. The research findings revealed that university libraries use AI applications such as ChatGPT, Gemini, and Grammarly to a certain extent; however, they have needs in developing institutional policies, enhancing personnel competencies, and planning related to AI. © 2024 University and Research Librarians Association (UNAK). All rights reserved.Article Performance Boost in QLEDs Using Octanethiol-Capped Core/Shell Quantum Dots(IOP Publishing Ltd, 2026-01-07) Yazici, Ahmet F.; Yuruc, Adnan M.; Kelestemur, Yusuf; Serin, Ramis Berkay; Kacar, Rifat; Ulku, Alper; Mutlugun, EvrenQuantum dots attract significant attention as one of the most promising colloidal nanocrystals with unique optical properties and potential applications for the next generation of display technology. In this paper, we evaluate the performance of CdZnSeS-based alloyed-shell quantum dots (QDs) for electroluminescence devices upon additional shell growth and ligand exchange. This includes core/shell (C/S) and core/shell/shell (C/S/S) QDs, whose latter includes an additional ZnS shell and octanethiol (OT) ligands. We present detailed characterizations of QDs using transmission electron microscopy, XRD, and various spectroscopic techniques and demonstrate their QD light emitting (QLEDs). We find the photoluminescence quantum yield of C/S/S QDs increased from 68.8% to 88.7% compared to C/S QDs whereas the emission linewidth narrows from 22.2 nm to 20.8 nm. QLEDs fabricated with C/S/S QDs exhibit a higher peak external quantum efficiency (EQE) of 4.1% and maximum luminance of 85 000 cd m-2, compared to 2.3% EQE and 67 000 cd m-2 for C/S QLEDs. In this respect, the OT-assisted shell growth significantly improves the optical property of QDs and performance of QLEDs, likely attributed to the enhanced charge balance and increased radiative recombination rate.Article A Small Indole Derivative Isolated From Caper (Capparis Ovata) as an Inducer of P53-Mediated Apoptosis in Prostate Cancer: Comprehensive In Vitro and In Silico Studies(Wiley, 2025-12-31) Acar, Ozden Ozgun; Gazioglu, Isil; Oruc, Hatice; Kale, Elif; Senol, Halil; Topcu, Gulacti; Sen, AlaattinNatural products with stunning chemical diversity have been extensively researched for their anticancer potential for more than fifty years. This study aimed to determine the effect of indole derivative 1H-indole-2-hydroxy-3-carboxylic acid (IHCA), isolated as a novel alkaloid from Capparis ovata, on selected tumor suppressor, apoptotic, and cell cycle regulatory genes, which are known to be important in cancer pathophysiology, on Caco-2 and LNCaP cells in comparison with Taxol. The molecular mechanism of IHCA's anticancer activity is essentially undefined. Different concentrations of IHCA increased the expression levels of apoptosis-related genes, including BCL-2 and TNF-alpha. In addition, the tumor suppressor genes PTEN, P53, and RB were increased in LNCaP and Caco-2 cells. KRAS, an oncogenic gene, was significantly downregulated by IHCA in LNCaP cells. Western blot results showed that the protein expression levels of P53 and PTEN in LNCaP cells were increased when treated with IHCA, whereas CDK4 and TNF-alpha were decreased. Finally, IHCA and doxorubicin significantly increased P53-driven luciferase activity compared to the control. The results strongly suggest that the novel natural compound IHCA has an anticancer effect involving the regulation of the P53 gene and its networks in vitro. The molecular docking and MD simulation analyses reveal that IHCA exhibits superior binding potential to the MDM2 protein compared to Nutlin-3a. MD simulations further confirm that IHCA maintains a more stable and consistent interaction with MDM2, as indicated by lower RMSD values and reduced ligand fluctuation. These results highlight IHCA's potential as a more effective MDM2 inhibitor, suggesting its promise as a lead compound for anticancer drug development.Clinical Trial Registration: Not applicable.Article Deep-Learning Detection of Open-Apex Teeth on Panoramic Radiographs Using YOLO Models(Springer, 2025-12-23) Edik, Merve; Celebi, Fatma; Cukurluoglu, AykaganObjectivesThe use of deep learning in detecting teeth with open apices can prevent the need for additional radiographs for patients. The presented study aims to detect open-apex teeth using You Only Look Once (YOLO)-based deep learning models and compare these models.MethodsA total of 966 panoramic radiographs were included in the study. Open-apex teeth in panoramic radiographs were labeled. During the labeling process, they were divided into 6 classes in the maxilla and mandible, namely incisors, premolars, and molars. AI models YOLOv3, YOLOv4, and YOLOv5 were used. To evaluate the performance of the three detection models, both overall and separately for each class in the test dataset, precision, recall, average precision (mAP), and F1 score were calculated.ResultsYOLOv4 achieved the highest overall performance with a mean average precision (mAP) of 87.84% at IoU (Intersection over Union) 0.5 (mAP@0.5), followed by YOLOv5 with 85.6%, and YOLOv3 with 84.46%. Regarding recall, YOLOv4 also led with 90%, while both YOLOv3 and YOLOv5 reached 89%. Moreover, the F1 score was the highest for YOLOv4 (0.87), followed by YOLOv3 (0.86) and YOLOv5 (0.85).ConclusionsIn this study, YOLOv3, YOLOv4, and YOLOv5 were evaluated for the detection of open-apex teeth, and their mAP, recall, and F1 scores exceeded 84%. Deep learning-based systems can provide faster and more accurate results in the detection of open-apex teeth. This may help reduce the need for additional radiographs from patients and aid dentists by saving time.Editorial Advances in Natural Building and Construction Materials(MDPI, 2025-12-16) Strzalkowski, Pawel; Sousa, Luis; Koken, Ekin; Strzałkowski, PawełArticle G-C3N4@Fe3O4 Nanomaterial Synthesis for Magnetic Solid-Phase Extraction and Photocatalytic Removal of Basic Blue 3(Springer Heidelberg, 2025-12-16) Kizil, Nebiye; Kayaci, Nilgun; Erbilgin, Duygu Erkmen; Yola, Mehmet Lutfi; Yilmaz, Erkan; Soylak, MustafaThe present research synthesized a g-C3N4@Fe3O4 hybrid material for efficient magnetic solid-phase extraction (MSPE) and photocatalytic degradation of Basic Blue 3 (BB3) dye from wastewater. Characterization of the synthesized g-C3N4@Fe3O4 was conducted through Fourier transform infrared spectroscopy (FTIR), X-ray diffraction (XRD), scanning electron microscopy (SEM), and energy-dispersive X-ray spectroscopy (EDX). The optimization of the method was carried out by examining parameters such as pH, g-C3N4@Fe3O4 amount, sample volume, and adsorption/desorption duration. In addition, analytical performance criteria such as limit of detection (LOD), limit of quantification (LOQ), and relative standard deviation (RSD) of the MSPE method were calculated as 1.29 mu g L-1, 4.28 mu g L-1, and 1.9%, respectively. The method was applied to real samples, including wastewater and textiles, and validated through addition/recovery studies for the magnetic solid-phase extraction procedure. The recoveries were gained between 91 and 100%. The reusability synthesized g-C3N4@Fe3O4 was also evaluated. The recoveries for Basic Blue 3 dye decreased to 81% after the fourth experiment. Furthermore, the photocatalytic performance of the g-C3N4@Fe3O4 hybrid material was evaluated due to its good surface area and strong interaction with Basic Blue 3 dye. The photocatalytic activity of g-C3N4@Fe3O4 hybrid material was calculated as 96.8% for 100 mg in 300 min.Article G-S a Prior Biological Knowledge-Based Pattern Detection and Enrichment Framework for Multi-Omics Data Integration(MDPI, 2025-11-29) Unlu Yazici, Miray; Bakir-Gungor, Burcu; Yousef, MalikThe rapid advancements in high-throughput technologies have led to a dramatic increase in diverse -omics data types, enabling comprehensive analyses, especially for complex diseases like cancer. Despite the development of multi-omics approaches, the challenges of scaling integration to massive, heterogeneous -omics datasets suggest that novel computational tools need to be designed. In this study, we propose an approach for integrating microRNA (miRNA) and messenger RNA (mRNA) expression data, incorporating prior biological knowledge (PBK). This approach scores and ranks groups of miRNAs and their associated genes using cross-validation iterations. The proposed method incorporates a Pattern detection (P) component to identify molecular motifs unique to each biological group. The analysis also facilitates the visualization of the groups, facilitating the identification of co-occurring groups and their characteristic features across iterations. Furthermore, the groups are scored using an over-representation analysis through a new Enrichment (E) component in each iteration. The clusters of the groups based on the Enrichment Scores (ESs) are visualized in a heatmap to obtain novel insights into the collective behavior and dependencies of the groups, aiming to understand the molecular mechanisms of complex diseases. The developed G-S-M-E tool not only provides performance metrics and biological scores at the group level but also offers comprehensive insights into intricate multi-omics interactions. In summary, our study emphasizes the importance of mathematical and data science methodologies in elucidating intricate multi-omics integration, yielding a formalized approach that deepens our comprehension of complex diseases.Article Assessment of the Quality of Tuffs in Central Anatolia, Turkey: A Quantitative Classification Approach(Acad Sci Czech Republic Inst Rock Structure & Mechanics, 2025-12-03) Koken, Ekin; Ince, IsmailThe growing global demand for dimension stones necessitates efficient and accurate evaluation methods to ensure their optimal use in various industries. To assess their suitability for various dimension stone applications, this study investigates tuffs from Central Anatolia, Turkey. For this purpose, the fundamental physical and mechanical properties of the tuffs were determined in laboratory studies, and a detailed durability assessment was conducted for each rock type. The analysis results indicate that most of the examined rocks are of low quality and more suitable for non-load-bearing applications. Based on the collected data, fuzzy clustering techniques were applied to develop a new classification system, categorising the tuffs into four classes (Class A-D) according to their potential applications. Additionally, a user-friendly MATLAB-based software tool was also developed to facilitate the implementation of the proposed classification system.Conference Object Shooting a Water Slug Into an Air Column with and without Vent(Amer Soc Mechanical Engineers, 2025-07-20) Bozkus, Zafer; Dincer, Ali Ersin; Tijsseling, Arris S.; van de Ven, FonsCompressed air is used to shoot a single water slug into an upward sloping pipe with elbow and orifice at its upper end. The experiment concerns a 12 m long pipe of 0.1 m diameter connected to a 0.5 m3 air vessel. The 10 to 50 kg heavy slugs are initially at rest in the lower part of the system. Because the upper end is closed by a flange with orifice, the water slug is expected not to hit the upstream elbow. It causes - like a piston - a fast compression of the air column ahead of it. Sometimes the slug bounces back and forth, which results in a pressure oscillation of serious amplitude. Numerical simulations based on an elementary mathematical model are normally used to interpret the pressure measurements, not all of which are fully understood. Lessons learned are summarised, and suggestions for improved experiments and enhanced simulations are given. The research is of importance, for example, for steam lines where liquid condensates may collect in lower parts after power failure. Start-up of the system will then lead to rapid slug acceleration and potentially damaging impact on elbows, orifices, and machinery.