WoS İndeksli Yayınlar Koleksiyonu
Permanent URI for this collectionhttps://hdl.handle.net/20.500.12573/394
Browse
569 results
Search Results
Article Unsettled Grounds, Enduring Bonds: A Literature Review on Employee Engagement during Organizational Change(Routledge Journals, Taylor & Francis Ltd, 2026) Abbas, Alhamzah F.; Ahmed, Ayesha; Usman, Muhammad; Shah, Syed Haider AliThis systematic review critically examines how employee engagement is conceptualized and operationalized within the context of organizational change, aiming to uncover prevailing themes, highlight conceptual inconsistencies, and identify gaps in the literature to advance understanding in evolving organizational settings. Guided by the the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA framework, the study analyzes 29 peer-reviewed journal articles published between 2006 and 2025, retrieved from the Scopus database, employing thematic synthesis and citation mapping to explore both organizational and individual-level influences on engagement during change. The findings reveal a dual-level framework: at the organizational level, leadership, organizational support, communication, and cultural and contextual dynamics play a central role, while at the individual level, psychological and emotional factors, behavioral patterns, attitudes toward change, and opportunities for skill development and career progression are key drivers. This review contributes by clarifying conceptual boundaries, identifying underexplored dimensions, and providing actionable insights for leaders and HR practitioners to sustain and enhance employee engagement during periods of organizational transition.Article Predicting Respiratory Infection and Symptoms Development Using Gene Set Enrichment Scores and Machine Learning(Elsevier Sci Ltd, 2026) Aydin, Zafer; Isik, Yunus EmreRecent advancements in precision medicine enable personalized predictions grounded in individual-level genetic data. However, relying solely on a single type of data can decrease prediction accuracy and limit the biological interpretability of the resulting models. Incorporating predefined genetic knowledge, such as derived gene sets, can improve performance and provide deeper biological insights for complex diseases, including respiratory infections. This study aimed to evaluate the usability of enrichment scores (ES), calculated using gene sets from the Molecular Signatures Database (MSigDB), as a feature representation for machine learning models to predict respiratory viral infections and symptom development. In addition, the proposed feature representation approach was extensively compared with the de facto gene-level expression representation. A total of 36,834 predefined gene sets were compiled from the MSigDB, and their ES values were calculated. Experiments used the GSE73072 dataset from Gene Expression Omnibus, containing gene expression profiles before and after virus exposure. Various machine learning and feature selection algorithms were applied to ES-based and probe-level feature sets. The results showed that both feature representation approaches achieved an area under the precision-recall curve (AUPRC) value greater than 0.90 for all tasks. Compared with the Respiratory Viral DREAM Challenge leaderboard phase, our models showed a 14.8% improvement in pre-exposure predictions (T0) and a 17.4% improvement in symptom classification. Using enrichment scores as a feature representation generally resulted in better performance than probe-level representation when predicting respiratory infections and symptom development. Identifying key gene sets through feature selection and comparing them with essential genes for respiratory viruses enabled a more comprehensive analysis, providing deeper insights into the pathways that contribute to these predictions.Article Modeling Commuter Mobility in Stockholm: A Spatial Panel Approach Using Mobile Phone Data(Springer Heidelberg, 2026) Fischer, Manfred M.; Osth, John; Toger, Marina; Turk, UmutThis paper examines the sociodemographic and socioeconomic determinants of regional commuter mobility in the Greater Stockholm Area using a heteroscedastic spatial Durbin panel data model estimated via Bayesian Markov Chain Monte Carlo methods. Drawing on mobile phone-derived origin-destination flows from the MIND database, the analysis exploits unusually fine spatial and temporal granularity across a balanced panel of 675 regions over the period 2018-2023. A k-nearest neighbor spatial weight matrix (k = 18), selected via Bayesian model comparison, captures the topological structure of interregional connectivity. By modeling spatial lags in both the dependent and independent variables, the framework enables explicit recovery of direct (own-region) and indirect (spillover) effects from scalar summary measures of the matrix of partial derivatives - providing robust posterior inference on how sociodemographic and socioeconomic conditions propagate through space. This approach addresses a key limitation of conventional non-spatial methods, which risk producing biased estimates by ignoring spatial interdependence. Empirical results confirm that spatial spillovers predominate over direct effects, with educational attainment and car ownership emerging as the principal determinants of commuter mobility, while age composition plays a comparatively modest role. These findings underscore that evaluating direct effects in isolation systematically underestimates the broader societal returns to mobility-enhancing regional policies.Article Electrospun PCL/PEG Nanofibers Incorporating Plantago Lanceolata Extract and Clove Oil for Dual-Function Wound Dressings(IOP Publishing Ltd, 2026) Teke, Selin Nur; Yuruk, Adile; Isoglu, Ismail AlperIn this study, we developed electrospun polycaprolactone/polyethylene glycol (PCL/PEG) nanofibers loaded with Plantago lanceolata (P. lanceolata) extract and clove oil to evaluate their combined potential for wound healing and antibacterial activity. PCL/PEG nanofibers were electrospun and post-loaded with P. lanceolata extract at 5%, 10%, and 15% (w/v), together with 1% (v/v) clove oil. Scanning electron microscope analysis showed a uniform, bead-free nanofibrous structure, with fiber diameters ranging from 768 +/- 140 nm to 892 +/- 206 nm and pore sizes from 3.93 +/- 0.97 & micro;m to 6.20 +/- 1.16 & micro;m. The nanofibers exhibited swelling ratios between 103.23 +/- 16.42% and 133.93 +/- 40.45% within 1 h and showed gradual degradation ranging from 25.92 +/- 2.84% to 57.76 +/- 0.92% over 21 d, with cumulative extract release approaching a plateau by day 28 under the experimental conditions. The incorporation of plant extract and essential oil initially increased the water contact angle from 15.97 +/- 1.07 degrees to 48.61 +/- 7.85 degrees, indicating that the nanofiber surface remained hydrophilic; at higher extract contents, the nanofibers transitioned to a superhydrophilic state. Antibacterial activity was primarily governed by clove oil, yielding up to 85.16 +/- 0.36% efficacy against E. coli (E. coli) and 79.90 +/- 0.29% against S. aureus (S. aureus). While P. lanceolata extract alone showed limited antibacterial activity, its presence within clove oil-loaded nanofibers consistently enhanced antibacterial performance at the composite level. In vitro scratch assays demonstrated pronounced wound closure at later time points (72-96 h), particularly for nanofibers containing higher extract concentrations, confirming the dominant contribution of P. lanceolata to the healing response. Overall, the electrospun PCL/PEG nanofibers represent a dual-function wound dressing, with clove oil contributing antibacterial protection and P. lanceolata extract supporting wound healing.Article Dissecting the Strain and Sex Specific Connectome Signatures of Unanesthetized C57BL/6J and DBA/2J Mice Using Magnetic Resonance Imaging(Wiley, 2026) Neuberger, Thomas; Kamens, Helen M.; Zhang, Nanyin; Ünsal, Hayreddin Said; Arefin, Tanzil M.Mouse models are an essential tool for understanding behavior and disease states in neuroscience research. While genetic and sex-specific effects have been reported in many neurodegenerative and psychiatric illnesses, these factors may also alter baseline neuroanatomical features of mice. This raises the question of whether the observed changes are related to the disease being studied (i.e., pathological differences) or if there are baseline strain or sex differences that may predispose animals to different responses. Over the past decade, tremendous effort has been made to map neural architecture at various scales; however, the complex relationships, including identifying genetic and sex-specific differences in brain structure and function, remain understudied. To bridge this gap, we used C57BL/6J and DBA/2J mice, two of the most widely used inbred mouse strains in neuroscience research, to investigate strain and sex-specific features of the brain connectome in awake animals using magnetic resonance imaging (MRI). By combining resting-state functional MRI and diffusion MRI, we found that the motor, sensory, limbic, and salience networks exhibit significant differences in both functional and structural domains between C57BL/6J and DBA/2J mice. Further, functional and structural properties of the brain were significantly correlated in both strains. Our results underscore the importance of considering these baseline differences when interpreting brain-behavior interactions in mouse models of human disorders.Article Comprehensive Evaluation of Microstructure–Property Relationships in Al-Added Sn-Zn Eutectic Solder Alloys from Thermal, Electrical, and Mechanical Perspectives(Springer, 2026) Bayram, Ümit; Şahin, Mevlüt(Sn-8.8Zn)-XAl (X = 0, 0.5, 1.0, 2.5, 5.0 wt.%) solder alloys were produced using a vacuum muffle furnace. The microstructural images, chemical compositions, and phase structures of the alloys were characterized by field emission scanning electron microscopy (FESEM), field emission scanning electron microscopy-energy dispersive x-ray spectroscopy (FESEM-EDX), and x-ray diffraction (XRD) analyses, respectively. According to FESEM images, a fully eutectic microstructure was observed in the Sn-8.8Zn alloy. With increasing Al content, dendritic structures formed and became denser. The mechanical properties of the alloys (ultimate tensile strength sigma UT, tensile yield strength sigma TY, compressive yield strength sigma CY, and Vickers hardness HV) were measured as a function of composition. The highest strength and hardness values were obtained for the (Sn-8.8Zn)-2.5Al alloy, whereas the (Sn-8.8Zn)-5.0Al alloy exhibited the highest ductility. The melting enthalpies (Delta H) and the specific heat differences between the solid and liquid phases (Delta CP) of the alloys were measured by differential scanning calorimetry (DSC) analysis. It was determined that an increase in the Al content of the eutectic alloy resulted in higher measured thermophysical properties. Finally, electrical resistivity (rho) values at T = 300 K, measured using the standard four-point probe method (FPPM), revealed an increase in resistivity up to 1.0 wt.% Al content, followed by a decrease beyond this value. In contrast, thermal conductivity values calculated using the Wiedemann-Franz law exhibited an opposite trend, decreasing up to 1.0 wt.% Al, and increasing thereafter. Based on microstructure-property relationships, the results were compared with previous studies, highlighting that (Sn-8.8Zn)-XAl alloys represent promising alternatives to lead-free solders.Article Activation and Avoidance Mediate the Relationship Between Depression and Life Satisfaction: Insights from Behavioral Activation Therapy(Springer, 2026) Koşan, Yavuz; Kaya, M. SiyabendBehavioral activation therapy has been increasingly used in depression intervention in recent years. It aims to increase the activation level and decrease the avoidance level. In this way, the individual's life satisfaction is expected to increase while trying to reduce depression. However, the relationship between depression and life satisfaction in behavioral activation therapy-based interventions has not been sufficiently revealed. Furthermore, the effects of activation and avoidance, which are the most basic concepts of behavioral activation therapy, and their underlying mechanisms are not well understood. Therefore, this study focused on this gap and aimed to explore the mediating roles of activation and avoidance variables in the relationship between depression and life satisfaction. Participants (N = 440) from a non-clinical sample group completed various self-report scales on depression, behavioral activation, and life satisfaction. Our results showed that depression and life satisfaction negatively predicted each other, and that activation and avoidance variables mediated this relationship in parallel. Accordingly, increasing activation and decreasing avoidance in young people with depressive symptoms may be an effective way to improve life satisfaction and reduce depression. Effective prevention efforts that reduce depression can increase the life satisfaction levels of young adults. In summary, behavioral activation and avoidance can be used to prevent depression and increase life satisfaction. The current study provides more information about the applicability of activation and avoidance, two important elements of behavioral activation therapy, in depression intervention.Article Three-Dimensional Culture Enhances the Antimicrobial Activity of Mesenchymal Stem Cells against Shiga Toxin-Producing Escherichia Coli O157:H7 in Vitro(Oxford Univ Press, 2026) Fidan, Özkan; Türkyılmaz, Süheyla; Bicer, Mesude; Öztürk, Esengül; Sener, FatmaAims This study examines the in vitro antibacterial activity of palatal adipose tissue-derived mesenchymal stem cells (PAT-MSCs) and the expression of antimicrobial peptide LL-37, with a particular focus on the effect of three-dimensional (3D) nanofibrillar cellulose-based hydrogel against Shiga toxin-producing Escherichia coli (STEC) harboring stx1 and/or stx2 genes isolated from mastitis milk in Turkey.Methods and results The antibacterial activity of conventionally cultured PAT-MSCs and 3D-cultured PAT-MSCs (PAT-MSCs-3D) was evaluated against STEC isolates and Escherichia coli ATCC 35150 using quantitative colony-forming unit (CFU) assay. The expression levels of antimicrobial peptide (AMP)-encoding genes were evaluated by quantitative real-time PCR, and AMP production was further validated by immunocytochemical staining. The results indicated that PAT-MSCs-3D exhibited significantly enhanced antibacterial efficacy, resulting in marked bacterial inhibition of all tested STEC strains, with bacterial reductions reaching up to 6-7 log under specific experimental conditions. Molecular and immunocytochemical analyses demonstrated increased expression of the antimicrobial peptide LL-37 in PAT-MSCs-3D compared to 2D cultures.Conclusions Our results show that culturing PAT-MSCs in 3D conditions leads to a significant enhancement in their antimicrobial properties, which could be linked to the upregulation of LL-37.Article Spatial Proximity and Accessibility Patterns of X-Minute Cities(Elsevier Ltd, 2026) Östh, John; Türk, Umut; Kourtit, Karima; Nijkamp, PeterThe 15-minute city concept has gained prominence in urban planning as a framework linking proximity, mobility, and quality of life at the intra-urban scale. An open question is whether this concept remains meaningful when applied to spatially connected urban regions or national urban systems. To address this issue, the new X-minute city concept allows proximity thresholds to vary with spatial context, mobility conditions, and service distribution. This paper develops an operational framework with the aim to examine and highlight spatial accessibility patterns from an X-minute city perspective, using the relatively urbanized area of the Netherlands as a national-scale case study. Accessibility is analyzed at the building level using OpenStreetMap data and a combination of object-based k-nearest-neighbor measures, distance-decay functions, inequality metrics, Average Nearest Neighbor analysis, and quantile regression. Concepts from central place theory are employed as an interpretive lens to understand service clustering and accessibility patterns, rather than as a formal model to be tested. The results show pronounced spatial disparities in accessibility between urban and rural areas, as well as substantial variation within cities. Major urban centers such as Amsterdam, Rotterdam, and Utrecht exhibit high accessibility levels due to dense service provision, while peripheral and rural areas face systematically lower accessibility. Next accessibility outcomes also differ sharply across population groups. Elderly residents and groups reliant on walking experience the highest levels of inequality, with accessibility distributions remaining highly uneven at short-distance thresholds. Cycling expands the range of effective activity spaces and reduces inequality, but does not offset structural disadvantages in areas with sparse service provision. The findings point to the limits of uniform proximity targets and reveal the need for context-sensitive accessibility planning that explicitly accounts for service distribution, mobility constraints, and population heterogeneity within national urban systems.Article Functional Characterization of Loss of RNF43 Reveals Neuronal Defects in a Caenorhabditis Elegans Model(MDPI, 2026) Kazan, Hasan Huseyin; Turkyilmaz, Zafer; Ekim, Burcu; Kaya, Cem; Ergun, Mehmet Ali; Sonmez, Kaan; Güzel, SinemRing finger protein 43 (RNF43) encodes a transmembrane E3 ubiquitin ligase that negatively regulates canonical Wnt signaling and is classically associated with serrated polyposis syndrome and colorectal cancer. In this study, regarding a homozygous truncating RNF43 variant (NM_001305545.1:c.1906C>T; p.Gln636Ter) in a patient segregating with a severe neurodevelopmental phenotype characterized by developmental delay, neonatal hypotonia, recurrent seizures, progressive microcephaly, and bilateral optic atrophy, the loss of polarity defective 1 (plr-1), an ortholog of RNF43, was modeled in Caenorhabditis elegans and the phenotype was primarily characterized. The results demonstrated that loss of the plr-1 disrupted gamma aminobutyric acid (GABA)ergic axon organization, reduced locomotor speed calculated from 60 s recordings, and altered developmental growth. These findings expand the phenotypic spectrum of RNF43 and support a dosage-dependent developmental role.