WoS İndeksli Yayınlar Koleksiyonu
Permanent URI for this collectionhttps://hdl.handle.net/20.500.12573/394
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Conference Object A Novel Signaling Pathway That Governs Tumor Metastasis: Ceramide Regulates Direct Crosstalk Between TGF-Β and Sonic Hedgehog Signaling(Federation of American Society for Experimental Biology, 2016) Gencer, Salih; Ogretmen, BesimConference Object Ceramide Is a Key Factor That Regulates the Crosstalk Between TGF-Β and Sonic Hedgehog Signaling at the Basal Cilia to Control Cell Migration and Tumor Metastasis(Federation Amer Soc Exp Biol, 2016-07) Gencer, Salih; Oleinik, Natalia; Dany, Mohammed; Ogretmen, BesimConference Object Citation - WoS: 2Citation - Scopus: 194.8 Km-Range Direct Detection Fiber Optic Distributed Acoustic Sensor(Optica Publishing Group (Formerly OSA), 2019) Uyar, F.; Onat, T.; Unal, C.; Kartaloǧlu, T.; Ozdur, I.; Özbay, E.This work demonstrates an ultra-long range direct detection fiber optic distributed acoustic sensor which can detect vibrations at a distance of 94.8 km with 10 m resolution along the sensing fiber. © 2023 Elsevier B.V., All rights reserved.Conference Object Citation - WoS: 2Citation - Scopus: 2Cascade Control of Magnetic Levitation with Sliding Modes(EDP Sciences edps@edpsciences.com, 2016) Eroǧlu, Y.; Ablay, G.The effectiveness and applicability of magnetic levitation systems need precise feedback control designs. A cascade control approach consisting of sliding mode control plus sliding mode control (SMC plus SMC) is designed to solve position control problem and to provide a high control performance and robustness to the magnetic levitation plant. It is shown that the SMC plus SMC cascade controller is able to eliminate the effects of the inductance related uncertainties of the electromagnetic coil of the plant and achieve a robust and precise position control. Experimental and numerical results are provided to validate the effectiveness and feasibility of the method. © 2016 Elsevier B.V., All rights reserved.Article TURKEY(ROUTLEDGE2 PARK SQ, MILTON PARK, ABINGDON OX14 4RN, OXFORD, ENGLAND, 2017) Salman, Yildiz; Polat, Ebru Omay; Yoney, Nilufer BaturayogluTURKEYConference Object Real-Time Robotic Car Control Using Brainwaves and Head Movement(IEEE, 345 E 47TH ST, NEW YORK, NY 10017 USA, 2018) Ozturk, Nedime; Yilmaz, Bulent; Onver, Ahmet YasinEmotiv Epoc Headset is a portable and low-cost device. In this study, Emotiv Epoc headset was used in order to obtain real-time gyro and EEG signals. The aim of this study was to control a robotic car in real-time by using head movement and opening and closing of the eyes. The maximum and minimum amplitude of the gyro signal, and the ratios of the beta waves of O1 and O2 channel to alpha waves of the same channels were used as threshold values. These threshold values were used to determine the direction of the robotic car. Because of its low-cost and easy implementation, Arduino Uno was used to manage the robotic car. This study has shown that brain waves and head movements can control a device in real time. This system has the potential to be used in neurofeedback and brain-computer interface applications.Master Thesis QOS-AWARE DOWNLINK SCHEDULING ALGORITHM FOR LTE NETWORKS: A CASE STUDY ON EDGE USERS(Abdullah Gül Üniversitesi, 2016) UYAN, OSMAN GÖKHAN4G/LTE (Long Term Evolution) is the state of the art wireless mobile broadband technology. It allows users to take advantage of high internet speeds. It makes use of the OFDM technology to offer high speed, which supplies the system resources both in time and frequency domain. The allocation of these resources is operated by a scheduling algorithm running on the base station. In this thesis, we investigate the performance of existing downlink scheduling algorithms in two ways. First we look at the performance of the algorithms in terms of throughput and fairness metrics. Second, we suggest a new fairness criterion, QoS-aware fairness which accepts that the system is fair if it can supply the users with the packet delays that they demand, and we evaluate the performance of the algorithms according to this metric. We also propose a new algorithm according to these two metrics, which especially increase the throughput gained by the edge users, the QoS-fairness, and classical fairness of the system without causing a big degradation in cell throughput when compared to other schedulers.Conference Object In-silico Identification of Papillary Thyroid Carcinoma Molecular Mechanisms(IEEE, 345 E 47TH ST, NEW YORK, NY 10017 USA, 2019-04) Ersoz, Nur Sebnem; Guzel, Yasin; Bakir-Gungor, BurcuRepresenting approximately 70% to 80% of thyroid cancers, papillary thyroid cancer (PTC) is the most common type of thyroid cancers. PTC is seen in all age groups, but it is seen more frequently in women than in men. Detection of biomarker proteins of papillary thyroid cancinoma plays an important role in the diagnosis of the disease. In this study, we aim to find target genes and pathways that are associated with papillar thyroid carcinoma, by integrating different bioinformatics methods. For this purpose, usingin-silico methodologies, candidate genes and pathways that could explain disease development mechanisms are identified. Throughout this study, firstly we identified differentially expressed genes as the amount of their protein product differ between patient and healthy groups. Secondly, by using active subnetworks search algorithms, topologic analyses and functional enrichment tests, candidate proteins,which could be thought as PTC biomarkers, and affected pathways are identified.Conference Object In-Silico Methods to Identify Common MicroRNAs and Pathways of Neuromuscular Diseases(IEEE, 345 E 47TH ST, NEW YORK, NY 10017 USA, 2019-04) Yazici, Miray Unlu; Menges, Evrim Aksu; Ulum, Yeliz Z. Akkaya; Hayta, Burcu Balci; Bakir-Gungor, Burcu; Balcihayta, Burcu; Akkaya Ulum, Yeliz Z.Neuromuscular disorders (NMD) are a heterogeneous group of diseases characterized by the loss of function of the peripheral nerves and muscles. However, there are no effective and widespread therapeutic approaches to prevent or delay the progression of these disease types. microRNAs (miRNAs) which cause significant changes in gene expression by binding to target messenger RNAs (mRNAs), are known to have an effect on disease mechanisms. In this study, by integrating different bioinformatics methods, we aim to find miRNAs, target genes and pathways related to a group of neuromuscular diseases. For this purpose, we determined 17 miRNAs that show significant expression changes between patient and healthy groups; predicted target genes of these miRNAs; and identified affected pathways using subnetwork discovery, functional enrichment based algorithms. In our study, we integrated different in-silico approaches that proceed in top-down manner or bottom-up manner. The identified candidate miRNAs, genes and pathways, which could help to explain neuromuscular disease development mechanisms, are now under investigation in wet-lab.Conference Object Effect of Bilinear Interpolation on the Texture Analysis of Colonoscopy Images(IEEE345 E 47TH ST, NEW YORK, NY 10017 USA, 2017) Kacmaz, Rukiye Nur; Yilmaz, BulentInterpolation is a method that is used to obtain unknown intensities with the help of known intensities on an image. This method is frequently used in the literature to eliminate light reflection on colonoscopy images. Texture features are the most important characteristics used to describe the region or objects of interest in the image. They are the measures of intensity variation of a surface that determine properties such as smoothness, roughness, and regularity. The aim of this study is to find out the how bilinear interpolation applied on colonoscopy images with reflection impact texture features obtained from the same images. A research carried out to make reasonable comparison between a texture feature from an image with no reflection and the same feature obtained from the same image with synthetically added reflections with various percentages. Using the approaches like gray level co-occurence matrix (GLCM), gray level run length matrix (GLRLM), neighborhood gray tone difference matrix (NGTDM) 126 features were extracted from each 32x32 sub-images coming from 610 colonoscopy images. Several of the features extracted from sub-images with no reflection and reflection were not statistically significantly different, while majority of them were affected from the reflections.
