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Koloidal Nanomalzemelerin Akıllı Kendinden Dizilimi ile Nanofotonik Mimarilerin Tasarımı ve Uygulaması
(Abdullah Gül Üniversitesi, Fen Bilimleri Enstitüsü, 2024) Şenel, Zeynep; Erdem, Talha
DNA-driven self-assembly techniques offer precise control over the positioning of colloidal nanoparticles through specific Watson–Crick interactions, and its reversibility via controlling the temperature of medium. This thesis explores an alternative strategy to control DNA-functionalized nanoparticles' binding/unbinding process by leveraging laser radiation, inducing localized heating within the nanoparticles to facilitate disassociation. First, we demonstrate the active manipulation of the optical properties of DNA-assembled gold nanoparticle networks via external optical excitation. Specifically, irradiation with a green hand-held laser yields a substantial ∼30% increase in total transmittance, accompanied by a transition from opaque to transparent states observable in optical microscopy images. The reversibility of this process is demonstrated by the restoration of the nanoparticle network post-irradiation cessation, underscoring the efficacy of optical excitation in tailoring both the structure and optical characteristics of DNA-mediated nanoparticle assemblies. Second, we introduce a method to tailor DNA-driven self-assembly of semiconductor nanoparticles on glass by applying an external optical field. A green laser directs the assembly of DNA-functionalized red-emitting quantum dots (QDs) on DNA-functionalized glass, leaving uncoated spots owing to localized heating. This effect becomes prominent after three hours of radiation using a laser with an irradiance of 57.1 W/cm2. Experiments with different lasers and nanoparticle types confirm the role of laser-induced heating in preventing QD-glass bonding via DNA-DNA interaction. Secondary coating of previously uncoated spots with DNA-functionalized green-emitting QDs and dye-functionalized DNAs indicates a successful hierarchical self-assembly. Our findings highlight the potential of light-assisted DNA-driven self-assembly for diverse nanoparticle architectures, promising applications in optoelectronics and nanophotonics. Keywords: Programmable self-assembly, DNA-driven self-assembly, localized heating, colloidal nanoparticles, DNA conjugation.
Optik Saçılma Temelli Rastgele Orman Destekli Parçacık Tespiti ve Sınıflandırılması
(Abdullah Gül Üniversitesi / Fen Bilimleri Enstitüsü, 2023) Genç, Sinan; Genç, Sinan; İçöz, Kutay; Erdem, Talha
Microplastics, tiny plastic particles with sizes smaller than 5 mm., are often found in oceans, rivers, lakes, and atmosphere due to plastic pollution. Microplastics releasing toxic chemicals threaten the environment and harm the aquatic life and humans. Especially, the accumulation of microplastics can have detrimental effects on the food chain as a result of larger organisms consuming smaller organisms. Detecting the microplastics is crucial but also challenging. Over the years, researchers have developed different detection methods. One of the standard methods is using spectroscopy tools such as Fourier transform infrared spectroscopy (FTIR) and Raman spectroscopy. These techniques can identify the chemical composition of microplastics, which can help determine their sources and potential impacts. Another method is the use of microscopy, which allows for the visualization and counting of microplastics in samples. However, these techniques require costly infrastructure, and these instruments being large in size significantly limits the mobility. As a remedy to the cost and mobility problems, in this thesis, we propose and demonstrate a low-cost, portable system to detect size, concentration, and refractive index of microplastics. Our system comprises of low-cost and low-weight components which are utilized for recording the scattering patterns of microplastics in aqueous media. We demonstrate successful predictions of the size and refractive index of microparticles at a given wavelength using a Random Forest Algorithm which relates the measured scattering pattern with the Mie theory. We further employ the refractive index information at various wavelengths for determining the material type of microplastics. We believe that our proposed system enabling an easy, fast, low-cost, and on-site detection of microplastics will be a beneficial tool for the fight against microplastics in the environment.

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